Cancer has long been the second-leading cause of death in the United States and represents the leading cause of death in midlife (age 40-60). While the prognosis for many cancers has vastly improved over the last thirty years, many cancers remain elusive due to the late-onset of symptoms, the specific...
Breakthroughs in large-scale biological data collection have resulted in a wealth of -omics (genomics, metabolomics, etc.) datasets in the literature. However, the development of appropriate computational techniques for their analysis is lacking, yet crucial for fully extracting the rich information contained in these datasets. The work in this dissertation describes...
Automated driving has become a very popular topic in the recent years and is becoming more and more of a reality. In this new trend, High Definition (HD) maps play an important role in many ways that will provide a safer and more efficient driving experience, especially in terms of...
The ability to control the crystalline ordering and morphology of polymeric nanomaterials is a grand challenge in the field of materials science, which could enable the development of functional materials able to solve long-standing problems in renewable energy and medicine. In this work, we explore a combination of supramolecular chemistry...
Recently, machine learning and deep learning, which have made many theoretical and empir- ical breakthroughs and is widely applied in various fields, attract a great number of researchers and practitioners. They have become one of the most popular research directions and plays a sig- nificant role in many fields, such...
Mammalian transcriptional regulation is well-known to be complex and highly context dependent. Different genetic and epigenetic features, including single nucleotide polymorphisms (SNPs) that function as cis- or trans-expression quantitative trait loci (eQTLs), transcription factor (TF) interaction profile with cis-regulatory elements (CREs), methylation of CpG dinucleotide sequences, and histone modification that...
Stroke affects millions of people each year and although modern medicine has improved chances of survival after stroke, it has not yet been able to affect a change in repairing damaged neural tissue leaving one to two-thirds of survivors with chronic disability in their affected upper-extremity; specifically, hemiparesis, hypertonicity, loss...
Data Science and related fields like Artificial Intelligence, Machine Learning, and Statistics provide indispensable research methods for understanding a wide variety of phenomena from large datasets. However, as methodical and empirical as these methods aim to be, there are many subjective and discretionary choices that the data scientist must make...
Radiofrequency ablation is a minimally-invasive treatment method that aims to destroy undesired tissue by exposing it to alternating current in the 100 kHz to 800 kHz frequency range and heating it until it is destroyed via coagulative necrosis. Ablation treatment is gaining momentum especially in cancer research, where the undesired...
Supervised learning model is one of the most fundamental machine learning models. It can provide powerful capability of prediction by learning complex patterns hidden in many, sometimes thousands, predictors. It can also be used as a building block of other machine learning tasks, like unsupervised learning and reinforcement learning. Such...